#!/usr/bin/python import os, sys, string dir1 = os.listdir(sys.argv[1]) dir2 = os.listdir('../1_KEGG2SDF/MOLS/'+sys.argv[1])+os.listdir('../1_KEGG2SDF/MOLS/RING_MORE_PROB') for file in dir1: if file[:string.find(file, '_omega')]+'.mol2' not in dir2: print file, 'nach Protonierung > 71 atoms -> weg!!!!' os.system('rm -rf '+sys.argv[1]+'/'+file)